dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01220
Location and strand information: 37 - 717 (-)
Family: 9.B.116.3.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01221
Location and strand information: 1081 - 4335 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01222
Location and strand information: 4357 - 6300 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01223
Location and strand information: 6316 - 8136 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01224
Location and strand information: 8160 - 9773 (+)
Family: PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7156
Protein molecular weight: 59184.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01225
Location and strand information: 9904 - 11451 (+)
Family: CE8|PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.9743
Protein molecular weight: 56530.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01226
Location and strand information: 11460 - 12935 (+)
Family: CE8|PL1_2|PL1
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5145
Protein molecular weight: 54148.54
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01227
Location and strand information: 13002 - 17606 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01228
Location and strand information: 17715 - 18047 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01229
Location and strand information: 18218 - 19966 (-)
Family: CE8|CE12|CE4
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9239
Protein molecular weight: 65373.16
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01230
Location and strand information: 20325 - 21296 (-)
Family: CE8
Protein type: CAZyme
Protein description: Pectinesterase A
Protein isoelectric point: 8.5188
Protein molecular weight: 36644.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01231
Location and strand information: 21306 - 22505 (-)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 7.7581
Protein molecular weight: 45887.31
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01232
Location and strand information: 22808 - 24214 (+)
Family: 4.A.5.1.4
Protein type: TC
Protein description: PTS system galactitol-specific EIIC component

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01233
Location and strand information: 24279 - 25199 (+)
Family: null
Protein type: null
Protein description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01234
Location and strand information: 25477 - 26925 (+)
Family: 2.A.1.14.25
Protein type: TC
Protein description: Hexuronate transporter

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01235
Location and strand information: 27322 - 30780 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004003_16|CGC1
Gene ID: MGYG000004003_01236
Location and strand information: 30755 - 31579 (-)
Family: 2.A.64.1.2
Protein type: TC
Protein description: Sec-independent protein translocase protein TatC

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000004003_01224
MGYG000004003_01225	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000004003_01226	PL1_e44\|CE8_e45\|4.2.2.2	pectin
MGYG000004003_01229	CE8_e6\|CE4_e36\|CE12_e9
MGYG000004003_01230	CE8_e34
MGYG000004003_01231	GH105_e8\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004003_01220	hypothetical protein	TC	37	717	-	9.B.116.3.2
MGYG000004003_01221	TonB-dependent receptor SusC	TC	1081	4335	+	1.B.14.6.1
MGYG000004003_01222	hypothetical protein	null	4357	6300	+	SusD-like_3\| SusD_RagB
MGYG000004003_01223	hypothetical protein	null	6316	8136	+	DUF5123
MGYG000004003_01224	hypothetical protein	CAZyme	8160	9773	+	PL1_2
MGYG000004003_01225	hypothetical protein	CAZyme	9904	11451	+	CE8\| PL1_2\| PL1
MGYG000004003_01226	hypothetical protein	CAZyme	11460	12935	+	CE8\| PL1_2\| PL1
MGYG000004003_01227	Sensor histidine kinase RcsC	TF	13002	17606	-	HTH_AraC
MGYG000004003_01228	hypothetical protein	null	17715	18047	-	No domain
MGYG000004003_01229	hypothetical protein	CAZyme	18218	19966	-	CE8\| CE12\| CE4
MGYG000004003_01230	Pectinesterase A	CAZyme	20325	21296	-	CE8
MGYG000004003_01231	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	21306	22505	-	GH105
MGYG000004003_01232	PTS system galactitol-specific EIIC component	TC	22808	24214	+	4.A.5.1.4
MGYG000004003_01233	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase	null	24279	25199	+	KduI
MGYG000004003_01234	Hexuronate transporter	TC	25477	26925	+	2.A.1.14.25
MGYG000004003_01235	hypothetical protein	null	27322	30780	-	AAA_11\| AAA_11\| AAA_12
MGYG000004003_01236	Sec-independent protein translocase protein TatC	TC	30755	31579	-	2.A.64.1.2
Protein ID	Protein Name	Type	Start	End	Strand	Signature